Primers for amplification of AIM-1

region

Primer name

sequence

Annealing

temp (C)

Exon 1

AIM-1 ex1 F

AIM-1 ex1 R

TCCAGCACCACCCCCTCCCTCTCAT

TGCAATGCCAGAAAGGTCCTCTTGA

59

Exon 2

AIM-1 ex2 F

AIM-1 ex2 R

AAAAGCAAAATAAAAGCAAGGAAGA

AGGCTTCTTTCCATTTCAGTTGTAA

55

Exon 3

AIM-1 ex3 F

AIM-1 ex3 R

CTCTGCTGTCTTCAGGGAGTTTTCC

ACCAACCCAAGGATGCTACCATTTG

56

Exon 4

AIM-1 ex4 F

AIM-1 ex4 R

CACTTTGTGTGATGGCTGACTGACA

ATTAAATACTGGCAGGCTCCGTAGT

56

Exon 5

AIM-1 ex5 F

AIM-1 ex5 R

GATGTGATAGGATGCGACTTGGTCA

GGGACTCATCCATCCAACACTTCAT

56

Exon 6

AIM-1 ex6 F

AIM-1 ex6 R

CCACAGATAAGGGGATTCTTTTGTT

ATGGTTGCAGTTGGTTGGGCATTTG

56

Exon 7

AIM-1 ex7 F

AIM-1 ex7 R

TTCAGTTCAGTTCCACATCACCAAT

GGGCGTCCAATGGGCAGACCCTAAG

53.5

Exon 3

RFLP

AIM-1 ex3 F

AIM-1 ex3 RF-R

CTCTGCTGTCTTCAGGGAGTTTTCC

CGCCGCCGCCAATGTTGCATCTTTACCTGTTCAGC

55

The temperature profile of PCR was at 94C for 3 min followed by 35 cycles at 96C for 15 sec, at XC (each listed in this table) for 30 sec and at 72C for 1 min.