Primers for
amplification of AIM-1
region |
Primer
name |
sequence |
Annealing
temp
(‹C) |
Exon
1 |
AIM-1
ex1 F AIM-1
ex1 R |
TCCAGCACCACCCCCTCCCTCTCAT TGCAATGCCAGAAAGGTCCTCTTGA |
59 |
Exon
2 |
AIM-1
ex2 F AIM-1
ex2 R |
AAAAGCAAAATAAAAGCAAGGAAGA AGGCTTCTTTCCATTTCAGTTGTAA |
55 |
Exon
3 |
AIM-1
ex3 F AIM-1
ex3 R |
CTCTGCTGTCTTCAGGGAGTTTTCC ACCAACCCAAGGATGCTACCATTTG |
56 |
Exon
4 |
AIM-1
ex4 F AIM-1
ex4 R |
CACTTTGTGTGATGGCTGACTGACA ATTAAATACTGGCAGGCTCCGTAGT |
56 |
Exon
5 |
AIM-1
ex5 F AIM-1
ex5 R |
GATGTGATAGGATGCGACTTGGTCA GGGACTCATCCATCCAACACTTCAT |
56 |
Exon
6 |
AIM-1
ex6 F AIM-1
ex6 R |
CCACAGATAAGGGGATTCTTTTGTT ATGGTTGCAGTTGGTTGGGCATTTG |
56 |
Exon
7 |
AIM-1
ex7 F AIM-1
ex7 R |
TTCAGTTCAGTTCCACATCACCAAT GGGCGTCCAATGGGCAGACCCTAAG |
53.5 |
Exon
3 RFLP |
AIM-1
ex3 F AIM-1
ex3 RF-R |
CTCTGCTGTCTTCAGGGAGTTTTCC CGCCGCCGCCAATGTTGCATCTTTACCTGTTCAGC |
55 |
The
temperature profile of PCR was at 94‹C for 3 min
followed by 35 cycles at 96‹C for 15 sec,
at X‹C (each listed in this
table) for 30 sec and at 72‹C for 1 min.